Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-4Q9EQM3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-4Q9EQM3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Gm14665-201ENSMUST00000122294 557 ntBASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Gm9211-201ENSMUST00000182882 975 ntBASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Gm5051-201ENSMUST00000204085 485 ntBASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Gm45770-201ENSMUST00000212105 616 ntBASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.53□□□□□ -0.24
Nkx2-4Q9EQM3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms