Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Gm27331-201ENSMUST00000183705 60 ntBASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Gm37424-201ENSMUST00000191727 561 ntBASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Gm40466-201ENSMUST00000212174 422 ntBASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Rsph9Q9D9V4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Gm16177-201ENSMUST00000120728 718 ntBASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Gm8062-201ENSMUST00000139696 444 ntBASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Gm29705-201ENSMUST00000212598 474 ntBASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rsph9Q9D9V4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Gm12203-201ENSMUST00000118235 598 ntBASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Gm12209-201ENSMUST00000120089 596 ntBASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.03□□□□□ -0.32
Rsph9Q9D9V4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms