Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Gm2594-201ENSMUST00000214774 742 ntBASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Syt7-205ENSMUST00000224135 1557 ntBASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf3c6Q9D8P7 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Gm5035-201ENSMUST00000215581 927 ntBASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Gm19220-201ENSMUST00000222682 803 ntBASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Grk6-205ENSMUST00000224653 2976 ntBASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf3c6Q9D8P7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf3c6Q9D8P7 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf3c6Q9D8P7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf3c6Q9D8P7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf3c6Q9D8P7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf3c6Q9D8P7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf3c6Q9D8P7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf3c6Q9D8P7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf3c6Q9D8P7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf3c6Q9D8P7 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Gtf3c6Q9D8P7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf3c6Q9D8P7 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf3c6Q9D8P7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf3c6Q9D8P7 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.28□□□□□ -0.12
Gtf3c6Q9D8P7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms