Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps33aQ9D2N9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps33aQ9D2N9 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps33aQ9D2N9 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps33aQ9D2N9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps33aQ9D2N9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps33aQ9D2N9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps33aQ9D2N9 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps33aQ9D2N9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps33aQ9D2N9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vps33aQ9D2N9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps33aQ9D2N9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Vps33aQ9D2N9 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps33aQ9D2N9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps33aQ9D2N9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vps33aQ9D2N9 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps33aQ9D2N9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 AA619741-201ENSMUST00000195095 646 ntBASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Thap2-203ENSMUST00000218989 527 ntBASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33aQ9D2N9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vps33aQ9D2N9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps33aQ9D2N9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.02□□□□□ -0.16
Vps33aQ9D2N9 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps33aQ9D2N9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps33aQ9D2N9 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vps33aQ9D2N9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps33aQ9D2N9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.02□□□□□ -0.16
Vps33aQ9D2N9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps33aQ9D2N9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps33aQ9D2N9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.02□□□□□ -0.16
Vps33aQ9D2N9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm18733-201ENSMUST00000173950 856 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm29310-201ENSMUST00000185468 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm21825-201ENSMUST00000185728 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm29109-201ENSMUST00000185895 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm21896-201ENSMUST00000186520 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm21873-201ENSMUST00000186728 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm21794-201ENSMUST00000187056 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm21880-201ENSMUST00000187275 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm21826-201ENSMUST00000187451 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm21198-201ENSMUST00000188393 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm21749-201ENSMUST00000189343 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm21901-201ENSMUST00000189568 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm29424-201ENSMUST00000189716 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm28599-201ENSMUST00000189838 694 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm21867-201ENSMUST00000189917 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm29269-201ENSMUST00000190087 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm21722-201ENSMUST00000190153 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm28423-201ENSMUST00000190701 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm21899-201ENSMUST00000190745 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm21910-201ENSMUST00000191163 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm21849-201ENSMUST00000191571 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm28678-201ENSMUST00000191593 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm20910-201ENSMUST00000193268 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Gm21871-201ENSMUST00000194621 696 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Mzt1-203ENSMUST00000227948 952 ntBASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33aQ9D2N9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms