Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Mir8117-201ENSMUST00000184773 107 ntBASIC13.29□□□□□ -0.28
Trim42Q9D2H5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Gm20553-201ENSMUST00000204205 844 ntBASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.29□□□□□ -0.28
Trim42Q9D2H5 CT009738.1-201ENSMUST00000219031 809 ntBASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.29□□□□□ -0.28
Trim42Q9D2H5 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim42Q9D2H5 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Gm15678-201ENSMUST00000117573 960 ntBASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Gm19087-201ENSMUST00000191430 946 ntBASIC13.28□□□□□ -0.28
Trim42Q9D2H5 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Gm18206-201ENSMUST00000207027 926 ntBASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Psmb5-202ENSMUST00000227257 622 ntBASIC13.28□□□□□ -0.28
Trim42Q9D2H5 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim42Q9D2H5 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms