Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Mms19Q9D071 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.21□□□□□ -0.13
Mms19Q9D071 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.21□□□□□ -0.13
Mms19Q9D071 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.21□□□□□ -0.13
Mms19Q9D071 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Gm18473-201ENSMUST00000220543 868 ntBASIC14.21□□□□□ -0.13
Mms19Q9D071 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Mms19Q9D071 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mms19Q9D071 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Mms19Q9D071 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Mms19Q9D071 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.21□□□□□ -0.14
Mms19Q9D071 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mms19Q9D071 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mms19Q9D071 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mms19Q9D071 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Mms19Q9D071 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.21□□□□□ -0.14
Mms19Q9D071 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.21□□□□□ -0.14
Mms19Q9D071 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.2□□□□□ -0.14
Mms19Q9D071 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Mms19Q9D071 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Gm5687-201ENSMUST00000118252 640 ntBASIC14.2□□□□□ -0.14
Mms19Q9D071 Gm13612-201ENSMUST00000119276 390 ntBASIC14.2□□□□□ -0.14
Mms19Q9D071 Gm11814-201ENSMUST00000119515 929 ntBASIC14.2□□□□□ -0.14
Mms19Q9D071 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.2□□□□□ -0.14
Mms19Q9D071 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.2□□□□□ -0.14
Mms19Q9D071 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.2□□□□□ -0.14
Mms19Q9D071 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.2□□□□□ -0.14
Mms19Q9D071 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.2□□□□□ -0.14
Mms19Q9D071 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.2□□□□□ -0.14
Mms19Q9D071 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.2□□□□□ -0.14
Mms19Q9D071 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mms19Q9D071 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.19□□□□□ -0.14
Mms19Q9D071 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Mms19Q9D071 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.19□□□□□ -0.14
Mms19Q9D071 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.19□□□□□ -0.14
Mms19Q9D071 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Mms19Q9D071 Gm27486-201ENSMUST00000184923 80 ntBASIC14.19□□□□□ -0.14
Mms19Q9D071 Gm38671-201ENSMUST00000200573 130 ntBASIC14.19□□□□□ -0.14
Mms19Q9D071 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.19□□□□□ -0.14
Mms19Q9D071 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.19□□□□□ -0.14
Mms19Q9D071 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Mms19Q9D071 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.19□□□□□ -0.14
Mms19Q9D071 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mms19Q9D071 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms