Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Gm11918-201ENSMUST00000121660 179 ntBASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Gm28911-201ENSMUST00000188837 117 ntBASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Gm9908-201ENSMUST00000211534 448 ntBASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.04□□□□□ -0.16
Rpa3Q9CQ71 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpa3Q9CQ71 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa3Q9CQ71 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa3Q9CQ71 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Rpa3Q9CQ71 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa3Q9CQ71 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa3Q9CQ71 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa3Q9CQ71 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa3Q9CQ71 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa3Q9CQ71 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rpa3Q9CQ71 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa3Q9CQ71 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rpa3Q9CQ71 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa3Q9CQ71 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms