Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Gm14767-201ENSMUST00000121559 586 ntBASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Gm25948-201ENSMUST00000175334 112 ntBASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Gm46209-201ENSMUST00000217912 553 ntBASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ska1Q9CPV1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ska1Q9CPV1 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Mir874-201ENSMUST00000104769 76 ntBASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Gm15678-201ENSMUST00000117573 960 ntBASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.55□□□□□ -0.4
Ska1Q9CPV1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Gm22175-201ENSMUST00000175007 78 ntBASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Gm3436-201ENSMUST00000179930 840 ntBASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms