Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Gm11745-201ENSMUST00000121669 448 ntBASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Mir7221-201ENSMUST00000184009 72 ntBASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Gm16476-201ENSMUST00000221544 139 ntBASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Gm15460-201ENSMUST00000118147 391 ntBASIC11.97□□□□□ -0.49
Krt88Q9CPR6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Gm24513-201ENSMUST00000174964 138 ntBASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Gm24420-201ENSMUST00000176676 59 ntBASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Gm4804-201ENSMUST00000182234 999 ntBASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Gm27397-201ENSMUST00000184997 107 ntBASIC11.97□□□□□ -0.49
Krt88Q9CPR6 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Krt88Q9CPR6 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Gm6736-201ENSMUST00000166583 948 ntBASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Gm18766-201ENSMUST00000189811 808 ntBASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Krt88Q9CPR6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms