Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.02□□□□□ -0.32
Trim8Q99PJ2 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim8Q99PJ2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trim8Q99PJ2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim8Q99PJ2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim8Q99PJ2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim8Q99PJ2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trim8Q99PJ2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim8Q99PJ2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim8Q99PJ2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim8Q99PJ2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim8Q99PJ2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Gm6912-201ENSMUST00000117218 544 ntBASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Gm15693-201ENSMUST00000120470 637 ntBASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim8Q99PJ2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Gm15393-201ENSMUST00000120499 219 ntBASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Gm22175-201ENSMUST00000175007 78 ntBASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Gm43703-201ENSMUST00000200523 763 ntBASIC13.01□□□□□ -0.33
Trim8Q99PJ2 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim8Q99PJ2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms