Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh15Q99PJ1 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh15Q99PJ1 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh15Q99PJ1 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh15Q99PJ1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh15Q99PJ1 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh15Q99PJ1 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Pcdh15Q99PJ1 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh15Q99PJ1 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh15Q99PJ1 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdh15Q99PJ1 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh15Q99PJ1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh15Q99PJ1 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdh15Q99PJ1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh15Q99PJ1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh15Q99PJ1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh15Q99PJ1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Gm11340-201ENSMUST00000119226 412 ntBASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Gm16397-201ENSMUST00000122201 494 ntBASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Gm22138-201ENSMUST00000158748 128 ntBASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Gm10774-201ENSMUST00000188689 204 ntBASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh15Q99PJ1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Gm28071-201ENSMUST00000190355 478 ntBASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 AC174797.2-202ENSMUST00000225729 568 ntBASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Gm9996-201ENSMUST00000070359 913 ntBASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh15Q99PJ1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 Gm9463-201ENSMUST00000206707 601 ntBASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms