Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Mir7023-201ENSMUST00000185093 64 ntBASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Gm43094-201ENSMUST00000196549 921 ntBASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cstf3Q99LI7 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Gm11524-201ENSMUST00000119349 807 ntBASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Gm26464-201ENSMUST00000157094 305 ntBASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Mir7221-201ENSMUST00000184009 72 ntBASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Gm38144-201ENSMUST00000192790 465 ntBASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Gm19078-201ENSMUST00000206311 727 ntBASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Gm45841-201ENSMUST00000207700 164 ntBASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Syt7-205ENSMUST00000224135 1557 ntBASIC12.84□□□□□ -0.35
Cstf3Q99LI7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cstf3Q99LI7 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms