Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb5Q91XZ5 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.59■□□□□ 0.09
Pcdhb5Q91XZ5 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb5Q91XZ5 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb5Q91XZ5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb5Q91XZ5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb5Q91XZ5 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb5Q91XZ5 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Gm15808-201ENSMUST00000119046 604 ntBASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb5Q91XZ5 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Gm8738-201ENSMUST00000172606 329 ntBASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb5Q91XZ5 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Morn2-202ENSMUST00000227729 656 ntBASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb5Q91XZ5 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb5Q91XZ5 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb5Q91XZ5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb5Q91XZ5 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb5Q91XZ5 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb5Q91XZ5 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb5Q91XZ5 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb5Q91XZ5 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb5Q91XZ5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb5Q91XZ5 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.55■□□□□ 0.08
Pcdhb5Q91XZ5 Gm12502-201ENSMUST00000120197 444 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms