Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
H1fooQ8VIK3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Gm11524-201ENSMUST00000119349 807 ntBASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Gm19078-201ENSMUST00000206311 727 ntBASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
H1fooQ8VIK3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Gm20949-201ENSMUST00000206478 952 ntBASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
H1fooQ8VIK3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.11□□□□□ -0.63
H1fooQ8VIK3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
H1fooQ8VIK3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H1fooQ8VIK3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
H1fooQ8VIK3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H1fooQ8VIK3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms