Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SfpqQ8VIJ6 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SfpqQ8VIJ6 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SfpqQ8VIJ6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SfpqQ8VIJ6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SfpqQ8VIJ6 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SfpqQ8VIJ6 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SfpqQ8VIJ6 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SfpqQ8VIJ6 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SfpqQ8VIJ6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SfpqQ8VIJ6 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.02□□□□□ -0.16
SfpqQ8VIJ6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.02□□□□□ -0.16
SfpqQ8VIJ6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 Gm24513-201ENSMUST00000174964 138 ntBASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 Gm5312-201ENSMUST00000203728 547 ntBASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SfpqQ8VIJ6 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Gm27397-201ENSMUST00000184997 107 ntBASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Gm18905-201ENSMUST00000205454 928 ntBASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SfpqQ8VIJ6 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SfpqQ8VIJ6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms