Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.13□□□□□ -0.15
TraipQ8VIG6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TraipQ8VIG6 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TraipQ8VIG6 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.12□□□□□ -0.15
TraipQ8VIG6 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.12□□□□□ -0.15
TraipQ8VIG6 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Mir6420-201ENSMUST00000185032 102 ntBASIC14.12□□□□□ -0.15
TraipQ8VIG6 Gm19891-201ENSMUST00000189771 303 ntBASIC14.12□□□□□ -0.15
TraipQ8VIG6 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TraipQ8VIG6 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.12□□□□□ -0.15
TraipQ8VIG6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.12□□□□□ -0.15
TraipQ8VIG6 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.12□□□□□ -0.15
TraipQ8VIG6 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.12□□□□□ -0.15
TraipQ8VIG6 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.11□□□□□ -0.15
TraipQ8VIG6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Gm13786-201ENSMUST00000122371 333 ntBASIC14.11□□□□□ -0.15
TraipQ8VIG6 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Gm26185-201ENSMUST00000157692 266 ntBASIC14.11□□□□□ -0.15
TraipQ8VIG6 Gm24548-201ENSMUST00000158650 108 ntBASIC14.11□□□□□ -0.15
TraipQ8VIG6 Gm27501-201ENSMUST00000183599 107 ntBASIC14.11□□□□□ -0.15
TraipQ8VIG6 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.11□□□□□ -0.15
TraipQ8VIG6 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 CT009754.4-201ENSMUST00000221430 565 ntBASIC14.11□□□□□ -0.15
TraipQ8VIG6 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.11□□□□□ -0.15
TraipQ8VIG6 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.11□□□□□ -0.15
TraipQ8VIG6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.11□□□□□ -0.15
TraipQ8VIG6 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TraipQ8VIG6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Mir874-201ENSMUST00000104769 76 ntBASIC14.1□□□□□ -0.15
TraipQ8VIG6 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.1□□□□□ -0.15
TraipQ8VIG6 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TraipQ8VIG6 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms