Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Gm22331-201ENSMUST00000158066 136 ntBASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Gm8810-201ENSMUST00000172895 754 ntBASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Gm45841-201ENSMUST00000207700 164 ntBASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ndc1Q8VCB1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Gm5687-201ENSMUST00000118252 640 ntBASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Mir1938-201ENSMUST00000158746 100 ntBASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Proscos-202ENSMUST00000178990 666 ntBASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Gm18041-201ENSMUST00000218210 618 ntBASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ndc1Q8VCB1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndc1Q8VCB1 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.52□□□□□ -0.4
Ndc1Q8VCB1 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ndc1Q8VCB1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Ndc1Q8VCB1 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndc1Q8VCB1 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndc1Q8VCB1 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndc1Q8VCB1 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndc1Q8VCB1 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ndc1Q8VCB1 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndc1Q8VCB1 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndc1Q8VCB1 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Ndc1Q8VCB1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndc1Q8VCB1 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ndc1Q8VCB1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ndc1Q8VCB1 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ndc1Q8VCB1 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ndc1Q8VCB1 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Ndc1Q8VCB1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ndc1Q8VCB1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ndc1Q8VCB1 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.52□□□□□ -0.41
Ndc1Q8VCB1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.52□□□□□ -0.41
Ndc1Q8VCB1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Ndc1Q8VCB1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.52□□□□□ -0.41
Ndc1Q8VCB1 Gm40466-201ENSMUST00000212174 422 ntBASIC12.52□□□□□ -0.41
Ndc1Q8VCB1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms