Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubqln1Q8R317 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Gm45668-201ENSMUST00000211271 493 ntBASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ubqln1Q8R317 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Gm15678-201ENSMUST00000117573 960 ntBASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.59□□□□□ -0.39
Ubqln1Q8R317 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ubqln1Q8R317 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms