Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 AC107638.1-201ENSMUST00000213690 1061 ntBASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Gm10752-201ENSMUST00000218348 729 ntBASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ddx54Q8K4L0 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Gm13888-201ENSMUST00000119148 422 ntBASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 CT025551.1-201ENSMUST00000223996 692 ntBASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 AC154849.4-201ENSMUST00000224868 365 ntBASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx54Q8K4L0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Gm15432-201ENSMUST00000121106 195 ntBASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 AC135669.1-202ENSMUST00000216742 540 ntBASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Gm10312-201ENSMUST00000078515 489 ntBASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.22■□□□□ 0.35
Ddx54Q8K4L0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms