Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf4Q8K4J2 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Gm18733-201ENSMUST00000173950 856 ntBASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Gm43514-201ENSMUST00000198852 424 ntBASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Gm18195-201ENSMUST00000207604 706 ntBASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf4Q8K4J2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.05□□□□□ -0.48
Ebf4Q8K4J2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms