Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PdgfcQ8CI19 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.56□□□□□ -0.08
PdgfcQ8CI19 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PdgfcQ8CI19 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PdgfcQ8CI19 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PdgfcQ8CI19 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.56□□□□□ -0.08
PdgfcQ8CI19 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PdgfcQ8CI19 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PdgfcQ8CI19 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PdgfcQ8CI19 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
PdgfcQ8CI19 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PdgfcQ8CI19 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.56□□□□□ -0.08
PdgfcQ8CI19 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PdgfcQ8CI19 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PdgfcQ8CI19 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
PdgfcQ8CI19 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PdgfcQ8CI19 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Gm11222-201ENSMUST00000119005 738 ntBASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Gm3786-201ENSMUST00000202659 378 ntBASIC14.55□□□□□ -0.08
PdgfcQ8CI19 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PdgfcQ8CI19 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.54□□□□□ -0.08
PdgfcQ8CI19 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.54□□□□□ -0.08
PdgfcQ8CI19 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfcQ8CI19 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfcQ8CI19 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PdgfcQ8CI19 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfcQ8CI19 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfcQ8CI19 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfcQ8CI19 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfcQ8CI19 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PdgfcQ8CI19 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfcQ8CI19 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfcQ8CI19 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfcQ8CI19 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.53□□□□□ -0.08
PdgfcQ8CI19 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfcQ8CI19 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfcQ8CI19 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfcQ8CI19 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfcQ8CI19 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfcQ8CI19 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.53□□□□□ -0.08
PdgfcQ8CI19 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms