Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rdh1Q8CGV4 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rdh1Q8CGV4 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Rdh1Q8CGV4 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rdh1Q8CGV4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rdh1Q8CGV4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Rdh1Q8CGV4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rdh1Q8CGV4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rdh1Q8CGV4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rdh1Q8CGV4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rdh1Q8CGV4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rdh1Q8CGV4 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rdh1Q8CGV4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rdh1Q8CGV4 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.88□□□□□ -0.35
Rdh1Q8CGV4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rdh1Q8CGV4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Rdh1Q8CGV4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Gm19184-201ENSMUST00000196798 928 ntBASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Gm45331-201ENSMUST00000209868 554 ntBASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Gm45880-201ENSMUST00000213041 853 ntBASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rdh1Q8CGV4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Gm11978-201ENSMUST00000122315 466 ntBASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Gm18054-201ENSMUST00000207539 555 ntBASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rdh1Q8CGV4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.85□□□□□ -0.35
Rdh1Q8CGV4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rdh1Q8CGV4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rdh1Q8CGV4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.85□□□□□ -0.35
Rdh1Q8CGV4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rdh1Q8CGV4 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rdh1Q8CGV4 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rdh1Q8CGV4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rdh1Q8CGV4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rdh1Q8CGV4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms