Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim52Q8CDV4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim52Q8CDV4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim52Q8CDV4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trim52Q8CDV4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim52Q8CDV4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim52Q8CDV4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim52Q8CDV4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Trim52Q8CDV4 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim52Q8CDV4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim52Q8CDV4 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim52Q8CDV4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Mir874-201ENSMUST00000104769 76 ntBASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Gm12291-201ENSMUST00000121627 311 ntBASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Gm8176-201ENSMUST00000191297 1099 ntBASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim52Q8CDV4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Gm14726-201ENSMUST00000120623 896 ntBASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Gm30285-201ENSMUST00000214614 422 ntBASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Gm6082-201ENSMUST00000215204 454 ntBASIC16.25■□□□□ 0.19
Trim52Q8CDV4 AC093022.1-201ENSMUST00000226949 1072 ntBASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Gm44207-201ENSMUST00000204568 1424 ntBASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim52Q8CDV4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Gm25668-201ENSMUST00000157700 129 ntBASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim52Q8CDV4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms