Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Vps53Q8CCB4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vps53Q8CCB4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vps53Q8CCB4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Gm15240-201ENSMUST00000118156 720 ntBASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Gm11814-201ENSMUST00000119515 929 ntBASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Gm2495-201ENSMUST00000191160 466 ntBASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps53Q8CCB4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Snora78-201ENSMUST00000158630 128 ntBASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.44■□□□□ 0.06
Vps53Q8CCB4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vps53Q8CCB4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.44■□□□□ 0.06
Vps53Q8CCB4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Gm15429-201ENSMUST00000151268 798 ntBASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Gm8463-201ENSMUST00000208573 613 ntBASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps53Q8CCB4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms