Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Gm10253-201ENSMUST00000194270 940 ntBASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Gm10275-201ENSMUST00000092620 635 ntBASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Tsen54Q8C2A2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Mir449b-201ENSMUST00000104833 80 ntBASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Gm7774-201ENSMUST00000200064 533 ntBASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Gm18049-201ENSMUST00000208909 581 ntBASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tsen54Q8C2A2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tsen54Q8C2A2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms