Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf2Q8BZT2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Gm26185-201ENSMUST00000157692 266 ntBASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Gm43133-201ENSMUST00000197472 463 ntBASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Gm43118-201ENSMUST00000199149 775 ntBASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf2Q8BZT2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Gm11637-201ENSMUST00000120601 592 ntBASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Gm28693-202ENSMUST00000190758 331 ntBASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Gm42627-201ENSMUST00000197347 224 ntBASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf2Q8BZT2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms