Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm6963-201ENSMUST00000147879 379 ntBASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col16a1Q8BLX7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Col16a1Q8BLX7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Col16a1Q8BLX7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Col16a1Q8BLX7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col16a1Q8BLX7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col16a1Q8BLX7 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Col16a1Q8BLX7 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col16a1Q8BLX7 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC17.08■□□□□ 0.32
Col16a1Q8BLX7 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC17.08■□□□□ 0.32
Col16a1Q8BLX7 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
Col16a1Q8BLX7 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC17.08■□□□□ 0.32
Col16a1Q8BLX7 Gm7207-201ENSMUST00000211575 1067 ntBASIC17.08■□□□□ 0.32
Col16a1Q8BLX7 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col16a1Q8BLX7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Col16a1Q8BLX7 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col16a1Q8BLX7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col16a1Q8BLX7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col16a1Q8BLX7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col16a1Q8BLX7 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Col16a1Q8BLX7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col16a1Q8BLX7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col16a1Q8BLX7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col16a1Q8BLX7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Gm12015-201ENSMUST00000117065 843 ntBASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Gm12208-201ENSMUST00000122004 163 ntBASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Gm3508-201ENSMUST00000186012 792 ntBASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Spcs1-203ENSMUST00000226374 592 ntBASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.07■□□□□ 0.32
Col16a1Q8BLX7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Dhrs4-202ENSMUST00000226168 828 ntBASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Gm12380-201ENSMUST00000119012 544 ntBASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Gm13045-201ENSMUST00000119019 712 ntBASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Gm27438-201ENSMUST00000183480 110 ntBASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Gm44551-201ENSMUST00000208804 171 ntBASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 AC141438.2-201ENSMUST00000215068 271 ntBASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 AC135114.1-201ENSMUST00000228682 270 ntBASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col16a1Q8BLX7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms