Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Usp54Q8BL06 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Usp54Q8BL06 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp54Q8BL06 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp54Q8BL06 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Usp54Q8BL06 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Usp54Q8BL06 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Usp54Q8BL06 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Gm12314-201ENSMUST00000118104 538 ntBASIC18.51■□□□□ 0.55
Usp54Q8BL06 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Dhrs4-202ENSMUST00000226168 828 ntBASIC18.51■□□□□ 0.55
Usp54Q8BL06 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Gm11597-201ENSMUST00000121423 964 ntBASIC18.51■□□□□ 0.55
Usp54Q8BL06 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC18.51■□□□□ 0.55
Usp54Q8BL06 AC163667.3-201ENSMUST00000225774 222 ntBASIC18.51■□□□□ 0.55
Usp54Q8BL06 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp54Q8BL06 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp54Q8BL06 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp54Q8BL06 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp54Q8BL06 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp54Q8BL06 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC18.5■□□□□ 0.55
Usp54Q8BL06 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp54Q8BL06 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp54Q8BL06 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp54Q8BL06 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC18.5■□□□□ 0.55
Usp54Q8BL06 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp54Q8BL06 Gm8798-201ENSMUST00000211877 1661 ntBASIC18.5■□□□□ 0.55
Usp54Q8BL06 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp54Q8BL06 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp54Q8BL06 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC18.5■□□□□ 0.55
Usp54Q8BL06 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC18.5■□□□□ 0.55
Usp54Q8BL06 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC18.5■□□□□ 0.55
Usp54Q8BL06 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Usp54Q8BL06 Gm42997-202ENSMUST00000200321 985 ntBASIC18.5■□□□□ 0.55
Usp54Q8BL06 Gm44136-201ENSMUST00000203819 1106 ntBASIC18.5■□□□□ 0.55
Usp54Q8BL06 Gm5369-201ENSMUST00000217499 588 ntBASIC18.5■□□□□ 0.55
Usp54Q8BL06 AC166344.1-202ENSMUST00000224139 234 ntBASIC18.5■□□□□ 0.55
Usp54Q8BL06 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp54Q8BL06 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp54Q8BL06 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp54Q8BL06 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp54Q8BL06 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp54Q8BL06 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Gm17040-202ENSMUST00000170597 889 ntBASIC18.49■□□□□ 0.55
Usp54Q8BL06 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Gm18556-201ENSMUST00000219748 1031 ntBASIC18.49■□□□□ 0.55
Usp54Q8BL06 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Sorbs3-204ENSMUST00000227929 2460 ntBASIC18.49■□□□□ 0.55
Usp54Q8BL06 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.49■□□□□ 0.55
Usp54Q8BL06 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp54Q8BL06 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Usp54Q8BL06 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC18.48■□□□□ 0.55
Usp54Q8BL06 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Usp54Q8BL06 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp54Q8BL06 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Usp54Q8BL06 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp54Q8BL06 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp54Q8BL06 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp54Q8BL06 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp54Q8BL06 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC18.48■□□□□ 0.55
Usp54Q8BL06 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp54Q8BL06 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp54Q8BL06 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp54Q8BL06 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms