Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Gm12928-201ENSMUST00000117115 573 ntBASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Gm6447-201ENSMUST00000118905 835 ntBASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Gm12138-201ENSMUST00000122180 951 ntBASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atg4bQ8BGE6 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Gm5687-201ENSMUST00000118252 640 ntBASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Gm11918-201ENSMUST00000121660 179 ntBASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Mir7221-201ENSMUST00000184009 72 ntBASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Gm9794-201ENSMUST00000202370 423 ntBASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Gm8463-201ENSMUST00000208573 613 ntBASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Itm2b-204ENSMUST00000228637 783 ntBASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg4bQ8BGE6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms