Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh19Q80TF3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh19Q80TF3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh19Q80TF3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh19Q80TF3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh19Q80TF3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh19Q80TF3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh19Q80TF3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh19Q80TF3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh19Q80TF3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh19Q80TF3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Gm37497-201ENSMUST00000195830 798 ntBASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Gm44069-201ENSMUST00000204898 506 ntBASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Gm10478-201ENSMUST00000084451 396 ntBASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh19Q80TF3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Gm6447-201ENSMUST00000118905 835 ntBASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Gm1335-201ENSMUST00000121653 386 ntBASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh19Q80TF3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdh19Q80TF3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms