Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Gm6754-201ENSMUST00000117124 913 ntBASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Gm12091-201ENSMUST00000146791 830 ntBASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3d21Q7TSG5 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Mir7654-201ENSMUST00000185082 70 ntBASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 AC132260.2-201ENSMUST00000224482 344 ntBASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sh3d21Q7TSG5 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Gm45668-201ENSMUST00000211271 493 ntBASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sh3d21Q7TSG5 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.52□□□□□ -0.08
Sh3d21Q7TSG5 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms