Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Gm25214-201ENSMUST00000104573 129 ntBASIC11.18□□□□□ -0.62
Rif1Q6PR54 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Gm19287-201ENSMUST00000203190 358 ntBASIC11.18□□□□□ -0.62
Rif1Q6PR54 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Rif1Q6PR54 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.18□□□□□ -0.62
Rif1Q6PR54 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Rif1Q6PR54 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.18□□□□□ -0.62
Rif1Q6PR54 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.18□□□□□ -0.62
Rif1Q6PR54 CT030135.2-201ENSMUST00000225255 893 ntBASIC11.18□□□□□ -0.62
Rif1Q6PR54 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Gm12015-201ENSMUST00000117065 843 ntBASIC11.17□□□□□ -0.62
Rif1Q6PR54 Gm11531-201ENSMUST00000117614 555 ntBASIC11.17□□□□□ -0.62
Rif1Q6PR54 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.17□□□□□ -0.62
Rif1Q6PR54 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.17□□□□□ -0.62
Rif1Q6PR54 Gm5340-201ENSMUST00000203733 880 ntBASIC11.17□□□□□ -0.62
Rif1Q6PR54 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Gm9139-201ENSMUST00000218817 700 ntBASIC11.17□□□□□ -0.62
Rif1Q6PR54 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.17□□□□□ -0.62
Rif1Q6PR54 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.17□□□□□ -0.62
Rif1Q6PR54 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.17□□□□□ -0.62
Rif1Q6PR54 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Rif1Q6PR54 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rif1Q6PR54 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.17□□□□□ -0.62
Rif1Q6PR54 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms