Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.13□□□□□ -0.15
CtifQ6PEE2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CtifQ6PEE2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Gm6550-201ENSMUST00000187574 993 ntBASIC14.12□□□□□ -0.15
CtifQ6PEE2 Gm2756-201ENSMUST00000195851 400 ntBASIC14.12□□□□□ -0.15
CtifQ6PEE2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.12□□□□□ -0.15
CtifQ6PEE2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Gm5859-201ENSMUST00000165401 2324 ntBASIC14.12□□□□□ -0.15
CtifQ6PEE2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CtifQ6PEE2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm29310-201ENSMUST00000185468 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm21825-201ENSMUST00000185728 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm29109-201ENSMUST00000185895 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm21896-201ENSMUST00000186520 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm21873-201ENSMUST00000186728 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm21794-201ENSMUST00000187056 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm21880-201ENSMUST00000187275 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm21826-201ENSMUST00000187451 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm21198-201ENSMUST00000188393 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm21749-201ENSMUST00000189343 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm21901-201ENSMUST00000189568 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm29424-201ENSMUST00000189716 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm28599-201ENSMUST00000189838 694 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm21867-201ENSMUST00000189917 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm29269-201ENSMUST00000190087 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm21722-201ENSMUST00000190153 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm28423-201ENSMUST00000190701 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm21899-201ENSMUST00000190745 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm21910-201ENSMUST00000191163 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm21849-201ENSMUST00000191571 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm28678-201ENSMUST00000191593 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm20910-201ENSMUST00000193268 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm21871-201ENSMUST00000194621 696 ntBASIC14.11□□□□□ -0.15
CtifQ6PEE2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms