Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sp140Q6NSQ5 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Gm12341-201ENSMUST00000119724 503 ntBASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms