Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scube3Q66PY1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.02□□□□□ -0.16
Scube3Q66PY1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scube3Q66PY1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scube3Q66PY1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scube3Q66PY1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Scube3Q66PY1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Scube3Q66PY1 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scube3Q66PY1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scube3Q66PY1 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.02□□□□□ -0.17
Scube3Q66PY1 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.02□□□□□ -0.17
Scube3Q66PY1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube3Q66PY1 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Gm43553-201ENSMUST00000200900 685 ntBASIC14.02□□□□□ -0.17
Scube3Q66PY1 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.02□□□□□ -0.17
Scube3Q66PY1 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Scube3Q66PY1 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube3Q66PY1 CT009495.1-201ENSMUST00000224221 862 ntBASIC14.02□□□□□ -0.17
Scube3Q66PY1 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube3Q66PY1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.02□□□□□ -0.17
Scube3Q66PY1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube3Q66PY1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Gm27839-201ENSMUST00000184242 106 ntBASIC14.01□□□□□ -0.17
Scube3Q66PY1 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.01□□□□□ -0.17
Scube3Q66PY1 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Gm10012-201ENSMUST00000078252 192 ntBASIC14.01□□□□□ -0.17
Scube3Q66PY1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube3Q66PY1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scube3Q66PY1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14□□□□□ -0.17
Scube3Q66PY1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14□□□□□ -0.17
Scube3Q66PY1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Scube3Q66PY1 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scube3Q66PY1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Scube3Q66PY1 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scube3Q66PY1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scube3Q66PY1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Scube3Q66PY1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scube3Q66PY1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scube3Q66PY1 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14□□□□□ -0.17
Scube3Q66PY1 Abhd6-203ENSMUST00000225234 1958 ntBASIC14□□□□□ -0.17
Scube3Q66PY1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scube3Q66PY1 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scube3Q66PY1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scube3Q66PY1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms