Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sdc3Q64519 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.8□□□□□ -0.36
Sdc3Q64519 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sdc3Q64519 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sdc3Q64519 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.8□□□□□ -0.36
Sdc3Q64519 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sdc3Q64519 Gm15371-201ENSMUST00000117057 784 ntBASIC12.8□□□□□ -0.36
Sdc3Q64519 Mir1894-201ENSMUST00000122802 81 ntBASIC12.8□□□□□ -0.36
Sdc3Q64519 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.8□□□□□ -0.36
Sdc3Q64519 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.8□□□□□ -0.36
Sdc3Q64519 Gm43438-201ENSMUST00000198133 379 ntBASIC12.8□□□□□ -0.36
Sdc3Q64519 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.8□□□□□ -0.36
Sdc3Q64519 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sdc3Q64519 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.8□□□□□ -0.36
Sdc3Q64519 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.8□□□□□ -0.36
Sdc3Q64519 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sdc3Q64519 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc3Q64519 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sdc3Q64519 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.79□□□□□ -0.36
Sdc3Q64519 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.79□□□□□ -0.36
Sdc3Q64519 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.79□□□□□ -0.36
Sdc3Q64519 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Gm8652-201ENSMUST00000181363 964 ntBASIC12.79□□□□□ -0.36
Sdc3Q64519 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.79□□□□□ -0.36
Sdc3Q64519 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Sdc3Q64519 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sdc3Q64519 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sdc3Q64519 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.79□□□□□ -0.36
Sdc3Q64519 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.79□□□□□ -0.36
Sdc3Q64519 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.79□□□□□ -0.36
Sdc3Q64519 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc3Q64519 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sdc3Q64519 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sdc3Q64519 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sdc3Q64519 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sdc3Q64519 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sdc3Q64519 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.78□□□□□ -0.36
Sdc3Q64519 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sdc3Q64519 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sdc3Q64519 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sdc3Q64519 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sdc3Q64519 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Sdc3Q64519 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sdc3Q64519 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sdc3Q64519 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sdc3Q64519 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sdc3Q64519 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sdc3Q64519 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sdc3Q64519 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sdc3Q64519 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sdc3Q64519 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sdc3Q64519 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Sdc3Q64519 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sdc3Q64519 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms