Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn1Q64347 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn1Q64347 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Clcn1Q64347 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.81■□□□□ 0.28
Clcn1Q64347 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.81■□□□□ 0.28
Clcn1Q64347 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Clcn1Q64347 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Clcn1Q64347 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Clcn1Q64347 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Clcn1Q64347 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Clcn1Q64347 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Clcn1Q64347 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Gm13297-201ENSMUST00000120205 934 ntBASIC16.81■□□□□ 0.28
Clcn1Q64347 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC16.81■□□□□ 0.28
Clcn1Q64347 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn1Q64347 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC16.81■□□□□ 0.28
Clcn1Q64347 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Clcn1Q64347 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Clcn1Q64347 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Clcn1Q64347 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.8■□□□□ 0.28
Clcn1Q64347 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.8■□□□□ 0.28
Clcn1Q64347 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Clcn1Q64347 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Clcn1Q64347 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Gm6023-201ENSMUST00000118217 606 ntBASIC16.8■□□□□ 0.28
Clcn1Q64347 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC16.8■□□□□ 0.28
Clcn1Q64347 Gm16379-201ENSMUST00000161469 348 ntBASIC16.8■□□□□ 0.28
Clcn1Q64347 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Gm8762-201ENSMUST00000193486 339 ntBASIC16.8■□□□□ 0.28
Clcn1Q64347 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC16.8■□□□□ 0.28
Clcn1Q64347 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC16.8■□□□□ 0.28
Clcn1Q64347 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC16.8■□□□□ 0.28
Clcn1Q64347 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Clcn1Q64347 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn1Q64347 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Clcn1Q64347 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn1Q64347 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn1Q64347 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.79■□□□□ 0.28
Clcn1Q64347 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn1Q64347 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn1Q64347 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn1Q64347 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Clcn1Q64347 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn1Q64347 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn1Q64347 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn1Q64347 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn1Q64347 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn1Q64347 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC16.79■□□□□ 0.28
Clcn1Q64347 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Clcn1Q64347 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn1Q64347 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.79■□□□□ 0.28
Clcn1Q64347 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Clcn1Q64347 Gm3890-201ENSMUST00000182416 207 ntBASIC16.79■□□□□ 0.28
Clcn1Q64347 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn1Q64347 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Clcn1Q64347 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn1Q64347 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms