Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scn9aQ62205 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn9aQ62205 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn9aQ62205 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn9aQ62205 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn9aQ62205 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Scn9aQ62205 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.31■□□□□ 0.04
Scn9aQ62205 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC15.31■□□□□ 0.04
Scn9aQ62205 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Gm17812-201ENSMUST00000204935 318 ntBASIC15.31■□□□□ 0.04
Scn9aQ62205 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Scn9aQ62205 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.31■□□□□ 0.04
Scn9aQ62205 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Scn9aQ62205 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Scn9aQ62205 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC15.31■□□□□ 0.04
Scn9aQ62205 Gm2673-201ENSMUST00000120958 1608 ntBASIC15.31■□□□□ 0.04
Scn9aQ62205 AC122197.2-201ENSMUST00000219196 1635 ntBASIC15.31■□□□□ 0.04
Scn9aQ62205 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.31■□□□□ 0.04
Scn9aQ62205 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Scn9aQ62205 Gm14832-201ENSMUST00000121289 322 ntBASIC15.31■□□□□ 0.04
Scn9aQ62205 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC15.31■□□□□ 0.04
Scn9aQ62205 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Scn9aQ62205 Gm17391-201ENSMUST00000171036 126 ntBASIC15.31■□□□□ 0.04
Scn9aQ62205 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC15.31■□□□□ 0.04
Scn9aQ62205 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn9aQ62205 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn9aQ62205 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Scn9aQ62205 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn9aQ62205 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn9aQ62205 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn9aQ62205 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn9aQ62205 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Scn9aQ62205 Gm12015-201ENSMUST00000117065 843 ntBASIC15.3■□□□□ 0.04
Scn9aQ62205 Gm8018-201ENSMUST00000173536 789 ntBASIC15.3■□□□□ 0.04
Scn9aQ62205 Gm39404-201ENSMUST00000216350 313 ntBASIC15.3■□□□□ 0.04
Scn9aQ62205 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.3■□□□□ 0.04
Scn9aQ62205 Gm10312-201ENSMUST00000078515 489 ntBASIC15.3■□□□□ 0.04
Scn9aQ62205 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn9aQ62205 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scn9aQ62205 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn9aQ62205 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scn9aQ62205 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn9aQ62205 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn9aQ62205 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Scn9aQ62205 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn9aQ62205 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn9aQ62205 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Scn9aQ62205 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn9aQ62205 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn9aQ62205 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn9aQ62205 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn9aQ62205 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Scn9aQ62205 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn9aQ62205 Gm4993-201ENSMUST00000118719 1174 ntBASIC15.29■□□□□ 0.04
Scn9aQ62205 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn9aQ62205 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn9aQ62205 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Scn9aQ62205 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn9aQ62205 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Scn9aQ62205 AC159819.2-201ENSMUST00000216151 342 ntBASIC15.29■□□□□ 0.04
Scn9aQ62205 AC135469.1-201ENSMUST00000225984 772 ntBASIC15.29■□□□□ 0.04
Scn9aQ62205 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.29■□□□□ 0.04
Scn9aQ62205 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC15.29■□□□□ 0.04
Scn9aQ62205 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn9aQ62205 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Scn9aQ62205 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn9aQ62205 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn9aQ62205 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn9aQ62205 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn9aQ62205 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Scn9aQ62205 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Scn9aQ62205 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn9aQ62205 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn9aQ62205 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.28■□□□□ 0.04
Scn9aQ62205 Gm44999-201ENSMUST00000207456 1493 ntBASIC15.28■□□□□ 0.04
Scn9aQ62205 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Scn9aQ62205 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn9aQ62205 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn9aQ62205 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Scn9aQ62205 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC15.28■□□□□ 0.04
Scn9aQ62205 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC15.28■□□□□ 0.04
Scn9aQ62205 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC15.28■□□□□ 0.04
Scn9aQ62205 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms