Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.15□□□□□ -0.47
VcanQ62059 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.15□□□□□ -0.47
VcanQ62059 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.15□□□□□ -0.47
VcanQ62059 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
VcanQ62059 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
VcanQ62059 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
VcanQ62059 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.14□□□□□ -0.47
VcanQ62059 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Gm14058-201ENSMUST00000116082 735 ntBASIC12.14□□□□□ -0.47
VcanQ62059 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.14□□□□□ -0.47
VcanQ62059 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.14□□□□□ -0.47
VcanQ62059 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Gm18204-201ENSMUST00000209835 793 ntBASIC12.14□□□□□ -0.47
VcanQ62059 Gm3619-201ENSMUST00000219947 775 ntBASIC12.14□□□□□ -0.47
VcanQ62059 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.14□□□□□ -0.47
VcanQ62059 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.14□□□□□ -0.47
VcanQ62059 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.14□□□□□ -0.47
VcanQ62059 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
VcanQ62059 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.14□□□□□ -0.47
VcanQ62059 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
VcanQ62059 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Gm32999-201ENSMUST00000192693 562 ntBASIC12.14□□□□□ -0.47
VcanQ62059 Mir7686-201ENSMUST00000200604 57 ntBASIC12.14□□□□□ -0.47
VcanQ62059 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.14□□□□□ -0.47
VcanQ62059 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.14□□□□□ -0.47
VcanQ62059 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VcanQ62059 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.13□□□□□ -0.47
VcanQ62059 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.13□□□□□ -0.47
VcanQ62059 Gm22121-201ENSMUST00000175148 54 ntBASIC12.13□□□□□ -0.47
VcanQ62059 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
VcanQ62059 Gm42511-201ENSMUST00000196160 234 ntBASIC12.13□□□□□ -0.47
VcanQ62059 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.13□□□□□ -0.47
VcanQ62059 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.13□□□□□ -0.47
VcanQ62059 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
VcanQ62059 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
VcanQ62059 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
VcanQ62059 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Gm15881-201ENSMUST00000148792 942 ntBASIC12.13□□□□□ -0.47
VcanQ62059 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.13□□□□□ -0.47
VcanQ62059 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
VcanQ62059 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.13□□□□□ -0.47
VcanQ62059 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.13□□□□□ -0.47
VcanQ62059 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.13□□□□□ -0.47
VcanQ62059 Gm14832-201ENSMUST00000121289 322 ntBASIC12.13□□□□□ -0.47
VcanQ62059 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.13□□□□□ -0.47
VcanQ62059 Mir3060-201ENSMUST00000175339 83 ntBASIC12.13□□□□□ -0.47
VcanQ62059 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.13□□□□□ -0.47
VcanQ62059 Gm45120-201ENSMUST00000208880 408 ntBASIC12.13□□□□□ -0.47
VcanQ62059 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
VcanQ62059 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
VcanQ62059 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.13□□□□□ -0.47
VcanQ62059 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.13□□□□□ -0.47
VcanQ62059 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
VcanQ62059 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms