Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx2Q61412 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Vsx2Q61412 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.97□□□□□ -0.33
Vsx2Q61412 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.97□□□□□ -0.33
Vsx2Q61412 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Vsx2Q61412 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Vsx2Q61412 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx2Q61412 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx2Q61412 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Vsx2Q61412 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx2Q61412 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx2Q61412 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx2Q61412 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Vsx2Q61412 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx2Q61412 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx2Q61412 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx2Q61412 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.96□□□□□ -0.33
Vsx2Q61412 Gm26464-201ENSMUST00000157094 305 ntBASIC12.96□□□□□ -0.33
Vsx2Q61412 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx2Q61412 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx2Q61412 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.96□□□□□ -0.33
Vsx2Q61412 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.96□□□□□ -0.33
Vsx2Q61412 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx2Q61412 Gm45384-201ENSMUST00000210451 277 ntBASIC12.96□□□□□ -0.33
Vsx2Q61412 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.96□□□□□ -0.33
Vsx2Q61412 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.96□□□□□ -0.33
Vsx2Q61412 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.96□□□□□ -0.33
Vsx2Q61412 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx2Q61412 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx2Q61412 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx2Q61412 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Vsx2Q61412 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vsx2Q61412 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vsx2Q61412 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vsx2Q61412 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vsx2Q61412 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vsx2Q61412 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vsx2Q61412 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Vsx2Q61412 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
Vsx2Q61412 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.95□□□□□ -0.34
Vsx2Q61412 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.95□□□□□ -0.34
Vsx2Q61412 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.95□□□□□ -0.34
Vsx2Q61412 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Vsx2Q61412 Gm15770-201ENSMUST00000117498 584 ntBASIC12.95□□□□□ -0.34
Vsx2Q61412 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.95□□□□□ -0.34
Vsx2Q61412 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.95□□□□□ -0.34
Vsx2Q61412 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.95□□□□□ -0.34
Vsx2Q61412 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.95□□□□□ -0.34
Vsx2Q61412 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.95□□□□□ -0.34
Vsx2Q61412 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.95□□□□□ -0.34
Vsx2Q61412 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.95□□□□□ -0.34
Vsx2Q61412 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.95□□□□□ -0.34
Vsx2Q61412 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Vsx2Q61412 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vsx2Q61412 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.94□□□□□ -0.34
Vsx2Q61412 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.94□□□□□ -0.34
Vsx2Q61412 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.94□□□□□ -0.34
Vsx2Q61412 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.94□□□□□ -0.34
Vsx2Q61412 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.94□□□□□ -0.34
Vsx2Q61412 Gm15678-201ENSMUST00000117573 960 ntBASIC12.94□□□□□ -0.34
Vsx2Q61412 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vsx2Q61412 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vsx2Q61412 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.94□□□□□ -0.34
Vsx2Q61412 Gm18041-201ENSMUST00000218210 618 ntBASIC12.94□□□□□ -0.34
Vsx2Q61412 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Vsx2Q61412 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vsx2Q61412 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms