Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Gm8213-201ENSMUST00000118191 441 ntBASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Gm18062-201ENSMUST00000208020 547 ntBASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Gm18055-201ENSMUST00000208254 547 ntBASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Gm8598-201ENSMUST00000221184 836 ntBASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfaip3Q60769 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Gm29649-201ENSMUST00000185649 419 ntBASIC12.5□□□□□ -0.41
Tnfaip3Q60769 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Gm18041-201ENSMUST00000218210 618 ntBASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Gm6091-201ENSMUST00000098307 165 ntBASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfaip3Q60769 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms