Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Gm2231-201ENSMUST00000125661 612 ntBASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Gm38002-201ENSMUST00000193255 180 ntBASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rc3h1Q4VGL6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Gm15198-201ENSMUST00000117283 177 ntBASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Gm12363-201ENSMUST00000122250 668 ntBASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Gm7399-201ENSMUST00000032395 858 ntBASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h1Q4VGL6 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h1Q4VGL6 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms