Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
R3hdm4Q4VBF2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
R3hdm4Q4VBF2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.3□□□□□ -0.12
R3hdm4Q4VBF2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
R3hdm4Q4VBF2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
R3hdm4Q4VBF2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
R3hdm4Q4VBF2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.3□□□□□ -0.12
R3hdm4Q4VBF2 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
R3hdm4Q4VBF2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
R3hdm4Q4VBF2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
R3hdm4Q4VBF2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.3□□□□□ -0.12
R3hdm4Q4VBF2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
R3hdm4Q4VBF2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
R3hdm4Q4VBF2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
R3hdm4Q4VBF2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
R3hdm4Q4VBF2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.3□□□□□ -0.12
R3hdm4Q4VBF2 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Gm8213-201ENSMUST00000118191 441 ntBASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Gm11978-201ENSMUST00000122315 466 ntBASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Gm22331-201ENSMUST00000158066 136 ntBASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.29□□□□□ -0.12
R3hdm4Q4VBF2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Gm12390-201ENSMUST00000117897 397 ntBASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Gm13123-201ENSMUST00000122173 492 ntBASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Gm27847-201ENSMUST00000183711 107 ntBASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Gm27375-201ENSMUST00000183799 107 ntBASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
R3hdm4Q4VBF2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
R3hdm4Q4VBF2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
R3hdm4Q4VBF2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
R3hdm4Q4VBF2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
R3hdm4Q4VBF2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
R3hdm4Q4VBF2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
R3hdm4Q4VBF2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
R3hdm4Q4VBF2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
R3hdm4Q4VBF2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
R3hdm4Q4VBF2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
R3hdm4Q4VBF2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
R3hdm4Q4VBF2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
R3hdm4Q4VBF2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
R3hdm4Q4VBF2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
R3hdm4Q4VBF2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
R3hdm4Q4VBF2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
R3hdm4Q4VBF2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
R3hdm4Q4VBF2 Gm11618-201ENSMUST00000117946 267 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms