Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Gm8810-201ENSMUST00000172895 754 ntBASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nhlrc4Q3UP44 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Gm16202-201ENSMUST00000117532 544 ntBASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Gm10156-201ENSMUST00000122364 462 ntBASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Nhlrc4Q3UP44 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nhlrc4Q3UP44 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms