Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.06□□□□□ -0.32
Sox4Q06831 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.06□□□□□ -0.32
Sox4Q06831 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.06□□□□□ -0.32
Sox4Q06831 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.06□□□□□ -0.32
Sox4Q06831 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sox4Q06831 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sox4Q06831 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.05□□□□□ -0.32
Sox4Q06831 Gm7561-201ENSMUST00000211203 886 ntBASIC13.05□□□□□ -0.32
Sox4Q06831 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.05□□□□□ -0.32
Sox4Q06831 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.05□□□□□ -0.32
Sox4Q06831 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.05□□□□□ -0.32
Sox4Q06831 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Sox4Q06831 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sox4Q06831 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.05□□□□□ -0.32
Sox4Q06831 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sox4Q06831 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox4Q06831 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Sox4Q06831 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.04□□□□□ -0.32
Sox4Q06831 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.04□□□□□ -0.32
Sox4Q06831 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.04□□□□□ -0.32
Sox4Q06831 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Gm12390-201ENSMUST00000117897 397 ntBASIC13.04□□□□□ -0.32
Sox4Q06831 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox4Q06831 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox4Q06831 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Sox4Q06831 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox4Q06831 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sox4Q06831 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.04□□□□□ -0.32
Sox4Q06831 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox4Q06831 Gm43433-201ENSMUST00000196573 481 ntBASIC13.04□□□□□ -0.32
Sox4Q06831 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox4Q06831 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox4Q06831 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.04□□□□□ -0.32
Sox4Q06831 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.04□□□□□ -0.32
Sox4Q06831 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.04□□□□□ -0.32
Sox4Q06831 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox4Q06831 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.04□□□□□ -0.32
Sox4Q06831 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox4Q06831 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.04□□□□□ -0.32
Sox4Q06831 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Sox4Q06831 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms