Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.09□□□□□ -0.31
SgcgP82348 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcgP82348 Gm37497-201ENSMUST00000195830 798 ntBASIC13.09□□□□□ -0.31
SgcgP82348 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SgcgP82348 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.09□□□□□ -0.31
SgcgP82348 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcgP82348 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.09□□□□□ -0.31
SgcgP82348 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.09□□□□□ -0.31
SgcgP82348 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.09□□□□□ -0.31
SgcgP82348 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcgP82348 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SgcgP82348 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcgP82348 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcgP82348 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcgP82348 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SgcgP82348 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcgP82348 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SgcgP82348 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcgP82348 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SgcgP82348 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SgcgP82348 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SgcgP82348 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
SgcgP82348 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SgcgP82348 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
SgcgP82348 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.08□□□□□ -0.32
SgcgP82348 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.08□□□□□ -0.32
SgcgP82348 Gm5187-201ENSMUST00000117317 991 ntBASIC13.08□□□□□ -0.32
SgcgP82348 Gm16202-201ENSMUST00000117532 544 ntBASIC13.08□□□□□ -0.32
SgcgP82348 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SgcgP82348 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.08□□□□□ -0.32
SgcgP82348 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.08□□□□□ -0.32
SgcgP82348 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.08□□□□□ -0.32
SgcgP82348 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.08□□□□□ -0.32
SgcgP82348 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.08□□□□□ -0.32
SgcgP82348 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.08□□□□□ -0.32
SgcgP82348 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SgcgP82348 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SgcgP82348 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcgP82348 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcgP82348 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SgcgP82348 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.07□□□□□ -0.32
SgcgP82348 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SgcgP82348 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcgP82348 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcgP82348 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcgP82348 Gm8805-201ENSMUST00000117848 313 ntBASIC13.07□□□□□ -0.32
SgcgP82348 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
SgcgP82348 Gm27514-201ENSMUST00000183692 110 ntBASIC13.07□□□□□ -0.32
SgcgP82348 Gm44069-201ENSMUST00000204898 506 ntBASIC13.07□□□□□ -0.32
SgcgP82348 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.07□□□□□ -0.32
SgcgP82348 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.07□□□□□ -0.32
SgcgP82348 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SgcgP82348 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcgP82348 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcgP82348 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcgP82348 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcgP82348 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcgP82348 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcgP82348 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcgP82348 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SgcgP82348 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcgP82348 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.07□□□□□ -0.32
SgcgP82348 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcgP82348 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SgcgP82348 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcgP82348 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcgP82348 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcgP82348 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.06□□□□□ -0.32
SgcgP82348 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SgcgP82348 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcgP82348 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcgP82348 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcgP82348 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcgP82348 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcgP82348 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.06□□□□□ -0.32
SgcgP82348 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcgP82348 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcgP82348 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SgcgP82348 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SgcgP82348 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
SgcgP82348 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SgcgP82348 Mir6420-201ENSMUST00000185032 102 ntBASIC13.06□□□□□ -0.32
SgcgP82348 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms