Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.08□□□□□ -0.64
Pdlim4P70271 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.08□□□□□ -0.64
Pdlim4P70271 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.08□□□□□ -0.64
Pdlim4P70271 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Gm17330-201ENSMUST00000221047 165 ntBASIC11.08□□□□□ -0.64
Pdlim4P70271 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Pdlim4P70271 Gm5161-201ENSMUST00000075243 853 ntBASIC11.08□□□□□ -0.64
Pdlim4P70271 Gm24447-201ENSMUST00000083977 338 ntBASIC11.08□□□□□ -0.64
Pdlim4P70271 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pdlim4P70271 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.08□□□□□ -0.64
Pdlim4P70271 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdlim4P70271 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pdlim4P70271 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Pdlim4P70271 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Pdlim4P70271 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Pdlim4P70271 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Gm15371-201ENSMUST00000117057 784 ntBASIC11.07□□□□□ -0.64
Pdlim4P70271 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.07□□□□□ -0.64
Pdlim4P70271 Mir7654-201ENSMUST00000185082 70 ntBASIC11.07□□□□□ -0.64
Pdlim4P70271 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.07□□□□□ -0.64
Pdlim4P70271 Gm6745-201ENSMUST00000199216 526 ntBASIC11.07□□□□□ -0.64
Pdlim4P70271 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.07□□□□□ -0.64
Pdlim4P70271 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.07□□□□□ -0.64
Pdlim4P70271 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.07□□□□□ -0.64
Pdlim4P70271 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.07□□□□□ -0.64
Pdlim4P70271 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pdlim4P70271 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.06□□□□□ -0.64
Pdlim4P70271 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pdlim4P70271 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.06□□□□□ -0.64
Pdlim4P70271 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdlim4P70271 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.06□□□□□ -0.64
Pdlim4P70271 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms