Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Gm13123-201ENSMUST00000122173 492 ntBASIC13.03□□□□□ -0.32
Lhx1P63006 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.03□□□□□ -0.32
Lhx1P63006 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.03□□□□□ -0.32
Lhx1P63006 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Lhx1P63006 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.03□□□□□ -0.32
Lhx1P63006 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx1P63006 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx1P63006 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx1P63006 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx1P63006 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx1P63006 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx1P63006 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx1P63006 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Lhx1P63006 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.02□□□□□ -0.32
Lhx1P63006 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx1P63006 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx1P63006 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Gm12742-201ENSMUST00000117326 410 ntBASIC13.02□□□□□ -0.33
Lhx1P63006 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.02□□□□□ -0.33
Lhx1P63006 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.02□□□□□ -0.33
Lhx1P63006 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.02□□□□□ -0.33
Lhx1P63006 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.02□□□□□ -0.33
Lhx1P63006 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.02□□□□□ -0.33
Lhx1P63006 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.02□□□□□ -0.33
Lhx1P63006 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lhx1P63006 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.02□□□□□ -0.33
Lhx1P63006 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.02□□□□□ -0.33
Lhx1P63006 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lhx1P63006 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx1P63006 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Lhx1P63006 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.01□□□□□ -0.33
Lhx1P63006 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lhx1P63006 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Lhx1P63006 Gm11637-201ENSMUST00000120601 592 ntBASIC13.01□□□□□ -0.33
Lhx1P63006 Gm1335-201ENSMUST00000121653 386 ntBASIC13.01□□□□□ -0.33
Lhx1P63006 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.01□□□□□ -0.33
Lhx1P63006 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Gm26927-201ENSMUST00000182385 965 ntBASIC13.01□□□□□ -0.33
Lhx1P63006 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.01□□□□□ -0.33
Lhx1P63006 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.01□□□□□ -0.33
Lhx1P63006 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lhx1P63006 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Gm10146-201ENSMUST00000072739 309 ntBASIC13.01□□□□□ -0.33
Lhx1P63006 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.01□□□□□ -0.33
Lhx1P63006 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.01□□□□□ -0.33
Lhx1P63006 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lhx1P63006 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lhx1P63006 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lhx1P63006 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx1P63006 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.01□□□□□ -0.33
Lhx1P63006 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Lhx1P63006 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms