Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.74□□□□□ -0.69
Sssca1P56873 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.74□□□□□ -0.69
Sssca1P56873 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sssca1P56873 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Sssca1P56873 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Sssca1P56873 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Sssca1P56873 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sssca1P56873 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.73□□□□□ -0.69
Sssca1P56873 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.73□□□□□ -0.69
Sssca1P56873 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.73□□□□□ -0.69
Sssca1P56873 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.73□□□□□ -0.69
Sssca1P56873 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sssca1P56873 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC10.73□□□□□ -0.69
Sssca1P56873 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sssca1P56873 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Gm6415-201ENSMUST00000118488 348 ntBASIC10.73□□□□□ -0.69
Sssca1P56873 Gm28630-201ENSMUST00000187806 498 ntBASIC10.73□□□□□ -0.69
Sssca1P56873 Gm7774-201ENSMUST00000200064 533 ntBASIC10.73□□□□□ -0.69
Sssca1P56873 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.73□□□□□ -0.69
Sssca1P56873 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Sssca1P56873 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.73□□□□□ -0.69
Sssca1P56873 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.73□□□□□ -0.69
Sssca1P56873 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.73□□□□□ -0.69
Sssca1P56873 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Sssca1P56873 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sssca1P56873 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sssca1P56873 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Gm12585-201ENSMUST00000117307 290 ntBASIC10.72□□□□□ -0.69
Sssca1P56873 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.72□□□□□ -0.69
Sssca1P56873 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.72□□□□□ -0.69
Sssca1P56873 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.72□□□□□ -0.69
Sssca1P56873 Gm27622-201ENSMUST00000183779 60 ntBASIC10.72□□□□□ -0.69
Sssca1P56873 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.72□□□□□ -0.69
Sssca1P56873 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.72□□□□□ -0.69
Sssca1P56873 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.72□□□□□ -0.69
Sssca1P56873 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Sssca1P56873 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.72□□□□□ -0.69
Sssca1P56873 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.72□□□□□ -0.69
Sssca1P56873 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.72□□□□□ -0.69
Sssca1P56873 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sssca1P56873 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.72□□□□□ -0.69
Sssca1P56873 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.72□□□□□ -0.69
Sssca1P56873 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms