Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Itm2b-204ENSMUST00000228637 783 ntBASIC13.18□□□□□ -0.3
Atxn1P54254 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Atxn1P54254 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Atxn1P54254 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Atxn1P54254 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Atxn1P54254 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.18□□□□□ -0.3
Atxn1P54254 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Atxn1P54254 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Atxn1P54254 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Atxn1P54254 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Atxn1P54254 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Atxn1P54254 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.18□□□□□ -0.3
Atxn1P54254 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.18□□□□□ -0.3
Atxn1P54254 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Atxn1P54254 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Atxn1P54254 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Atxn1P54254 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Atxn1P54254 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Atxn1P54254 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Atxn1P54254 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Gm5687-201ENSMUST00000118252 640 ntBASIC13.17□□□□□ -0.3
Atxn1P54254 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Atxn1P54254 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.17□□□□□ -0.3
Atxn1P54254 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Gm16379-201ENSMUST00000161469 348 ntBASIC13.17□□□□□ -0.3
Atxn1P54254 Mir5120-201ENSMUST00000175020 78 ntBASIC13.17□□□□□ -0.3
Atxn1P54254 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Gm7593-201ENSMUST00000187246 644 ntBASIC13.17□□□□□ -0.3
Atxn1P54254 Gm8762-201ENSMUST00000193486 339 ntBASIC13.17□□□□□ -0.3
Atxn1P54254 Gm43947-201ENSMUST00000203019 959 ntBASIC13.17□□□□□ -0.3
Atxn1P54254 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.17□□□□□ -0.3
Atxn1P54254 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.17□□□□□ -0.3
Atxn1P54254 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.17□□□□□ -0.3
Atxn1P54254 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Atxn1P54254 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Atxn1P54254 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.17□□□□□ -0.3
Atxn1P54254 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.17□□□□□ -0.3
Atxn1P54254 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Atxn1P54254 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Atxn1P54254 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Atxn1P54254 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atxn1P54254 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.16□□□□□ -0.3
Atxn1P54254 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Atxn1P54254 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Atxn1P54254 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Atxn1P54254 Gm6023-201ENSMUST00000118217 606 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Gm4986-201ENSMUST00000119731 549 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Atxn1P54254 Gm7029-201ENSMUST00000173226 450 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Atxn1P54254 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Atxn1P54254 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.16□□□□□ -0.3
Atxn1P54254 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.16□□□□□ -0.3
Atxn1P54254 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Atxn1P54254 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms